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The Gut Microbiome in Polycystic Ovary Syndrome and Its Association with Metabolic Traits Original paper

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

April 27, 2025

  • Women’s Health
    Women’s Health

    Women’s health, a vital aspect of medical science, encompasses various conditions unique to women’s physiological makeup. Historically, women were often excluded from clinical research, leading to a gap in understanding the intricacies of women’s health needs. However, recent advancements have highlighted the significant role that the microbiome plays in these conditions, offering new insights and potential therapies. MicrobiomeSignatures.com is at the forefront of exploring the microbiome signature of each of these conditions to unravel the etiology of these diseases and develop targeted microbiome therapies.

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

Last Updated: 2025

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What was studied?

This study investigated the association between the gut microbiome and polycystic ovary syndrome (PCOS), particularly its metabolic traits, in women approaching the end of their reproductive years. Using a population-based cohort from the Northern Finland Birth Cohort 1966 (NFBC1966), the research team analyzed fecal microbiome profiles via 16S rRNA sequencing and correlated the bacterial composition with clinical, hormonal, and metabolic characteristics, including markers of glucose tolerance and insulin sensitivity. The core objective was to determine whether microbial composition or diversity could distinguish PCOS cases from controls and whether specific taxa were linked to features like insulin resistance and prediabetes, which are commonly observed in PCOS.

Who was studied?

The study enrolled 303 women, including 102 women diagnosed with PCOS and 201 age- and BMI-matched healthy controls, all drawn from the NFBC1966 longitudinal study. These participants provided fecal samples for microbiome analysis and underwent clinical examinations, including hormonal assays, oral glucose tolerance tests (OGTT), and metabolic profiling. The diagnostic criteria for PCOS were based on self-reported oligomenorrhea, hirsutism, or a medical diagnosis of PCOS or polycystic ovaries (PCOs) at ages 31 and 46, respectively. The cohort was ethnically homogenous and geographically stable, which reduced external confounding factors such as diet, genetics, and socioeconomic variability.

What were the most important findings?

The study found that PCOS itself did not significantly alter overall gut microbiome diversity or composition when comparing PCOS women to matched controls. Alpha diversity, which measures the richness and evenness of microbial species, and beta diversity, which compares the community structure between groups, were not significantly different between the two groups. However, significant associations were uncovered between specific microbial taxa and PCOS-related metabolic traits.

Notably, the genus Ruminococcaceae was positively correlated with favorable metabolic markers, including higher sex hormone-binding globulin (SHBG) levels and improved insulin sensitivity (measured via the Matsuda and Disposition indices). The Clostridiales Family XIII AD3011 group also displayed positive correlations with metabolic health indicators and negative correlations with markers of glucose dysregulation, including glycated hemoglobin (HbA1c) and BMI. Furthermore, within the PCOS group, women with prediabetes had significantly reduced microbial diversity and elevated levels of the genus Dorea compared to PCOS women with normal glucose tolerance. This genus has been previously linked to both metabolic dysfunction and increased blood glucose, reinforcing its potential as a microbial biomarker for insulin resistance and prediabetes in PCOS.

Although the overall gut microbiome profile did not drastically differ between PCOS and non-PCOS women, the identified microbial shifts correlated strongly with metabolic impairments common in PCOS, suggesting that metabolic status, rather than PCOS per se, may drive microbiome alterations.

What are the greatest implications of this study?

This study emphasizes the critical role of metabolic health in shaping the gut microbiome profile of women with PCOS rather than PCOS diagnosis alone. The identification of taxa like Ruminococcaceae and Dorea as being closely linked to insulin sensitivity and glucose metabolism offers promising microbial signatures for future diagnostic and therapeutic development. Clinicians managing PCOS should consider metabolic health as a key modulator of gut microbiome composition, especially when evaluating or planning interventions aimed at microbiome modulation.

The findings also point toward the potential utility of microbial markers to predict metabolic complications in PCOS patients, particularly the risk of developing prediabetes or type 2 diabetes. This aligns with a growing understanding of the gut-liver-metabolism axis and highlights microbiome-based diagnostics and interventions as a future component of personalized care in PCOS management.

Polycystic ovary syndrome (PCOS)

Polycystic ovary syndrome (PCOS) is a common endocrine disorder that affects women of reproductive age, characterized by irregular menstrual cycles, hyperandrogenism, and insulin resistance. It is often associated with metabolic dysfunctions and inflammation, leading to fertility issues and increased risk of type 2 diabetes and cardiovascular disease.

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