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Altered gut microbiota in patients with idiopathic Parkinson’s disease: an age-sex matched case-control study Original paper

Researched by:

  • Dr. Umar ID
    Dr. Umar

    User avatarClinical Pharmacist and Clinical Pharmacy Master’s candidate focused on antibiotic stewardship, AI-driven pharmacy practice, and research that strengthens safe and effective medication use. Experience spans digital health research with Bloomsbury Health (London), pharmacovigilance in patient support programs, and behavioral approaches to mental health care. Published work includes studies on antibiotic use and awareness, AI applications in medicine, postpartum depression management, and patient safety reporting. Developer of an AI-based clinical decision support system designed to enhance antimicrobial stewardship and optimize therapeutic outcomes.

    Read More

November 17, 2025

Researched by:

  • Dr. Umar ID
    Dr. Umar

    User avatarClinical Pharmacist and Clinical Pharmacy Master’s candidate focused on antibiotic stewardship, AI-driven pharmacy practice, and research that strengthens safe and effective medication use. Experience spans digital health research with Bloomsbury Health (London), pharmacovigilance in patient support programs, and behavioral approaches to mental health care. Published work includes studies on antibiotic use and awareness, AI applications in medicine, postpartum depression management, and patient safety reporting. Developer of an AI-based clinical decision support system designed to enhance antimicrobial stewardship and optimize therapeutic outcomes.

    Read More

Last Updated: 2023-01-01

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

Location
Turkey
Sample Site
Feces
Species
Homo sapiens

What was studied?

This age–sex matched case–control study investigated altered gut microbiota in idiopathic Parkinson’s disease using 16S rRNA sequencing of stool samples. The goals were to define PD-specific microbiome shifts at phylum, family, and genus levels and to examine whether these changes relate to disease duration and non-motor symptoms (NMS), especially gastrointestinal and other brain–gut axis features.

Who was studied?

Researchers analyzed 84 Turkish adults: 42 idiopathic PD patients and 42 healthy, age–sex matched spouses as controls, reducing confounding from shared environment and diet. All had standardized stool collection, and PD patients were characterized by disease duration and presence or absence of NMS, allowing within-PD subgroup comparisons of microbiota patterns.

Most important findings

At the phylum level, PD patients showed reduced Firmicutes and increased Verrucomicrobiota, suggesting loss of short-chain fatty acid (SCFA)–producing taxa and expansion of mucin degraders such as Akkermansia. Families Lactobacillaceae and Akkermansiaceae were significantly higher in PD, while Coriobacteriales Incertae Sedis were lower. At the genus level, Lactobacillus was significantly increased, whereas Lachnospiraceae ND3007 group, Tyzzerella, Fusicatenibacter, Eubacterium hallii group, and Ruminococcus gauvreauii group all decreased, many being key Firmicutes butyrate producers that support epithelial integrity and immune regulation. Prevotella was reduced but not significantly, still aligning directionally with prior PD studies.

Importantly, microbiota composition differed between PD patients with and without NMS, and disease duration appeared to shape the degree of dysbiosis, linking longer-standing PD and higher NMS burden to more pronounced loss of SCFA producers and expansion of mucin-degrading taxa.

Key implications

Clinically, this work supports a PD-associated microbiome signature featuring reduced Firmicutes/SCFA producers and increased Lactobacillus and Akkermansia. These shifts plausibly contribute to impaired barrier function, low-grade inflammation, and NMS via the gut–brain axis. The taxa identified—particularly Lactobacillus, Akkermansia, and specific Lachnospiraceae/Ruminococcus clusters—are strong candidates for PD microbiome signature panels and targets for diet-, prebiotic-, probiotic-, or microbiota-based interventions that monitor NMS outcomes.

Citation

Babacan Yildiz G, Kayacan ZC, Karacan I, Sumbul B, Elibol B, Gelisin O, Akgul O. Altered gut microbiota in patients with idiopathic Parkinson’s disease: An age–sex matched case–control study. Acta Neurologica Belgica. 2023;123:999-1009. doi.org/10.1007/s13760-023-02195-0

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