Effect of the ketogenic diet on gut microbiome composition and metabolomics in polycystic ovarian syndrome rats induced by letrozole and a high-fat diet Original paper
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Dr. Umar
Read MoreClinical Pharmacist and Clinical Pharmacy Master’s candidate focused on antibiotic stewardship, AI-driven pharmacy practice, and research that strengthens safe and effective medication use. Experience spans digital health research with Bloomsbury Health (London), pharmacovigilance in patient support programs, and behavioral approaches to mental health care. Published work includes studies on antibiotic use and awareness, AI applications in medicine, postpartum depression management, and patient safety reporting. Developer of an AI-based clinical decision support system designed to enhance antimicrobial stewardship and optimize therapeutic outcomes.
Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.
Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.
What was studied?
This study investigated the ketogenic diet and gut microbiome in PCOS, examining how an eight-week ketogenic diet (KD) alters gut microbial composition, metabolomic profiles, and androgen-related metabolic pathways in a rat model of polycystic ovary syndrome induced by letrozole and a high-fat diet. The research aimed to clarify whether changes in microbial communities and metabolites mediate improvements in insulin resistance and hyperandrogenism. Using 16S rRNA sequencing and untargeted metabolomics, the investigators mapped shifts in bacterial taxa, steroidogenic metabolites, and their intercorrelations to uncover microbial signatures relevant to PCOS pathophysiology.
Who was studied?
The study used thirty-six-week-old female Sprague-Dawley rats divided into control, PCOS-IR (insulin-resistant), and PCOS-IR-KD groups. PCOS was induced through daily oral letrozole plus a high-fat diet for four weeks, producing ovarian cysts, estrous disruption, hyperandrogenism, and elevated HOMA-IR. Ten PCOS-IR rats received the ketogenic diet for eight weeks while controls continued standard chow. Fecal samples from five to six rats per group underwent microbiome and metabolomic profiling, while serum samples and ovarian tissues were collected from eight rats per group for biochemical and histologic analysis.
Most important findings
KD intervention reduced body weight, normalized estrous cycling, lowered testosterone and luteinizing hormone, and improved insulin levels and HOMA-IR. In the gut microbiome, KD reduced alpha diversity but shifted community structure toward increased Bacteroides and Lachnoclostridium, both short-chain fatty acid–producing genera, and decreased Colidextribacter, Ruminococcus, and unclassified Firmicutes known to correlate with dysregulated glucose and lipid metabolism. At the phylum level, KD partially restored the Firmicutes-to-Bacteroidetes ratio disrupted in PCOS. Metabolomics identified significant reductions in steroidogenic intermediates—testosterone, androstenedione, 17α-hydroxyprogesterone, 7α-hydroxytestosterone—and in metabolites linked with insulin resistance such as UDP-N-acetylglucosamine. Correlation analysis showed testosterone and androstenedione positively associated with Ruminococcus, Roseburia, and unclassified clostridiales, but negatively associated with Bacteroides and Lachnoclostridium. These combined findings indicate coordinated remodeling of microbial and metabolic networks central to androgen and insulin signaling.
Key implications
The ketogenic diet modulates gut microbial composition and steroidogenic metabolites in a way that aligns with clinical improvements in PCOS-related insulin resistance and hyperandrogenism. The increased abundance of Bacteroides and Lachnoclostridium suggests enhanced short-chain fatty acid production, potentially improving metabolic inflammation and mucosal barrier integrity. However, the KD’s reduction in microbial diversity and its contradictory effects on Bacteroides abundance—sometimes linked with PCOS pathology—highlight a need for caution when interpreting microbial shifts as strictly beneficial. This work strengthens the mechanistic link between dietary interventions, gut microbiota, and hormone regulation in PCOS, offering microbial signatures that could inform precision nutrition or probiotic-adjunct therapies. Further clinical studies are necessary to determine optimal KD composition and duration and to evaluate long-term effects on microbial diversity and metabolic health.
Citation
Wang R, Zhao Y, Fang X, et al. Effect of the ketogenic diet on gut microbiome composition and metabolomics in polycystic ovarian syndrome rats induced by letrozole and a high-fat diet.Nutrition. 2023;114:112127. doi:10.1016/j.nut.2023.112127
Polycystic ovary syndrome (PCOS) is a common endocrine disorder that affects women of reproductive age, characterized by irregular menstrual cycles, hyperandrogenism, and insulin resistance. It is often associated with metabolic dysfunctions and inflammation, leading to fertility issues and increased risk of type 2 diabetes and cardiovascular disease.