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Endometriosis induces gut microbiota alterations in mice Original paper

May 19, 2025

  • Women’s Health
    Women’s Health

    Women’s health, a vital aspect of medical science, encompasses various conditions unique to women’s physiological makeup. Historically, women were often excluded from clinical research, leading to a gap in understanding the intricacies of women’s health needs. However, recent advancements have highlighted the significant role that the microbiome plays in these conditions, offering new insights and potential therapies. MicrobiomeSignatures.com is at the forefront of exploring the microbiome signature of each of these conditions to unravel the etiology of these diseases and develop targeted microbiome therapies.

  • Endometriosis
    Endometriosis

    Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

Last Updated: 2018

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What Was Studied?

This study investigated the effects of endometriosis on gut microbiota composition in a murine model, specifically evaluating microbial shifts during the progression of endometriosis. Researchers employed a prospective and randomized design, inducing endometriosis in mice through intraperitoneal injection of endometrial tissues. The primary aim was to characterize changes in gut microbiota over time, utilizing 16S ribosomal-RNA gene sequencing to assess microbial diversity and composition at 7, 14, 28, and 42 days post-induction. The experiment included mock groups as controls, which received saline injections instead of endometrial tissue, to account for any procedural effects.

Who Was Studied?

The study involved C57BL6 mice, a commonly used murine model, to mimic endometriosis development. Mice were divided into two groups: those receiving endometrial tissue injections to induce endometriosis, and mock controls receiving only saline. The animals were sacrificed at four different time points (7, 14, 28, and 42 days) for fecal sample collection and microbiota analysis. Researchers conducted 16S rRNA sequencing on these samples to evaluate alterations in microbial communities associated with endometriosis progression.

What Were the Most Important Findings?

The study revealed that endometriosis induced significant alterations in gut microbiota composition, particularly at 42 days post-induction. Beta diversity analysis demonstrated that the microbial community structure diverged substantially from the mock controls, indicating dysbiosis. At the phylum level, there was an increased Firmicutes/Bacteroidetes ratio, a hallmark often linked to inflammatory conditions. Furthermore, Actinobacteria and Betaproteobacteria were more abundant in the endometriosis group, whereas Bacteroidetes was more dominant in the control group. At the genus level, the study identified increases in Ruminococcaceae-UGG-014, Bifidobacterium, and Parasutterella among endometriosis mice. These microbial shifts suggest that endometriosis disrupts normal gut microbial homeostasis, potentially influencing systemic inflammation and immune modulation. The researchers noted that while alpha diversity remained similar between groups, the specific microbial composition shifted dramatically over the 42-day period. This timeline suggests that gut dysbiosis in endometriosis is progressive and may exacerbate immune system imbalances over time.

Taxonomic LevelMicrobiota Findings in Endometriosis-Induced Mice
Phylum LevelIncreased Firmicutes/Bacteroidetes ratio. Elevated levels of Actinobacteria and Betaproteobacteria.
Class LevelEnhanced representation of Clostridia and Actinobacteria classes.
Order LevelNotable increase in Lactobacillales and Clostridiales.
Family LevelSignificant enrichment of Ruminococcaceae and Bifidobacteriaceae.
Genus LevelMarked increases in Ruminococcaceae-UGG-014, Bifidobacterium, and Parasutterella.
Alpha DiversityNo significant difference in microbial richness or evenness compared to controls.
Beta DiversitySignificant divergence from mock controls, indicating altered microbial community structure.
Inflammatory AssociationsAltered microbiota profile is linked to systemic inflammation and immune modulation, suggesting a role in endometriosis progression.

What Are the Greatest Implications of This Study

The findings underscore the role of gut microbiota dysbiosis in the progression of endometriosis, revealing distinct shifts in microbial populations, especially an elevated Firmicutes/Bacteroidetes ratio. These changes mirror dysbiosis seen in other inflammatory diseases, suggesting that gut microbiota may contribute to systemic inflammation and immune dysfunction in endometriosis. The study highlights the potential for microbiota-targeted therapies to restore gut microbial balance as a therapeutic approach. Additionally, the identification of enriched genera such as Bifidobacterium and Parasutterella suggests potential biomarkers for non-invasive diagnostics. The progressive nature of microbiota alteration observed at 42 days further indicates that early intervention targeting microbial communities could mitigate inflammatory responses and possibly slow disease progression. This research provides a mechanistic link between gut dysbiosis and endometriosis pathology, paving the way for microbiome-based therapeutic strategies.

Endometriosis

Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

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