Research Feeds

View All
Characterizing the gut microbiota in females with infertility and preliminary results of a water-soluble dietary fiber intervention study A prebiotic dietary pilot intervention restores faecal metabolites and may be neuroprotective in Parkinson’s Disease Diagnosis of the menopause: NICE guidance and quality standards Causes of Death in End-Stage Kidney Disease: Comparison Between the United States Renal Data System and a Large Integrated Health Care System Factors affecting the absorption and excretion of lead in the rat Factors associated with age at menarche, menstrual knowledge, and hygiene practices among schoolgirls in Sharjah, UAE Cadmium transport in blood serum The non-pathogenic Escherichia coli strain Nissle 1917 – features of a versatile probiotic Structured Exercise Benefits in Euthyroid Graves’ Disease: Improved Capacity, Fatigue, and Relapse Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease A Pilot Microbiota Study in Parkinson’s Disease Patients versus Control Subjects, and Effects of FTY720 and FTY720-Mitoxy Therapies in Parkinsonian and Multiple System Atrophy Mouse Models Dysbiosis of the Saliva Microbiome in Patients With Polycystic Ovary Syndrome Integrated Microbiome and Host Transcriptome Profiles Link Parkinson’s Disease to Blautia Genus: Evidence From Feces, Blood, and Brain Gut microbiota modulation: a narrative review on a novel strategy for prevention and alleviation of ovarian aging Long-term postmenopausal hormone therapy and endometrial cancer

Nickel chelation therapy as an approach to combat multi-drug resistant enteric pathogens Original paper

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

    Read More
  • Dr. Umar ID
    Dr. Umar

    User avatarClinical Pharmacist and Clinical Pharmacy Master’s candidate focused on antibiotic stewardship, AI-driven pharmacy practice, and research that strengthens safe and effective medication use. Experience spans digital health research with Bloomsbury Health (London), pharmacovigilance in patient support programs, and behavioral approaches to mental health care. Published work includes studies on antibiotic use and awareness, AI applications in medicine, postpartum depression management, and patient safety reporting. Developer of an AI-based clinical decision support system designed to enhance antimicrobial stewardship and optimize therapeutic outcomes.

    Read More

November 27, 2025

  • Metals
    Metals

    Heavy metals play a significant and multifaceted role in the pathogenicity of microbial species.

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

    Read More
  • Dr. Umar ID
    Dr. Umar

    User avatarClinical Pharmacist and Clinical Pharmacy Master’s candidate focused on antibiotic stewardship, AI-driven pharmacy practice, and research that strengthens safe and effective medication use. Experience spans digital health research with Bloomsbury Health (London), pharmacovigilance in patient support programs, and behavioral approaches to mental health care. Published work includes studies on antibiotic use and awareness, AI applications in medicine, postpartum depression management, and patient safety reporting. Developer of an AI-based clinical decision support system designed to enhance antimicrobial stewardship and optimize therapeutic outcomes.

    Read More

Last Updated: 2024-06-23

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What was studied

Nickel chelation therapy was investigated as a strategy to inhibit multidrug-resistant (MDR) enteric pathogens, with a focus on how dimethylglyoxime (DMG) affects the growth and virulence of Salmonella enterica serovar Typhimurium and Klebsiella pneumoniae. This work explored how nickel sequestration disrupts key microbial enzymes—particularly hydrogenases and urease—central to the metabolic fitness and pathogenicity of these organisms. Since nickel-dependent enzymes form well-established components of microbial physiology, these findings also contribute a microbiome-relevant signature: the dependency of certain pathogens on nickel for enzymatic activity. The study provides a detailed look at how DMG interferes with these microbial systems.

Who was studied

The investigation used three bacterial strains: MDR Salmonella Typhimurium ATCC 700408, non-MDR Salmonella Typhimurium ATCC 14028, and MDR Klebsiella pneumoniae ATCC BAA-2472. In vivo analysis involved BALB/c mice and Galleria mellonella larvae to assess toxicity and therapeutic potential. These models allowed evaluation of systemic and localised effects of DMG, including pathogen load in organs and host survival outcomes.

Most important findings

DMG displayed bacteriostatic effects against all tested Enterobacteriaceae strains at millimolar concentrations, with growth suppression thresholds differing by species. Hydrogenase activity in Salmonella—an enzyme system heavily reliant on nickel—was significantly inhibited by DMG beginning at 0.5 mM, and nearly abolished at 10 mM. The table on page 3 of the article clearly shows dose-dependent inhibition, with activity restored partially by the addition of nickel chloride. The page 4 urease activity table illustrates similar findings for Klebsiella, showing complete loss of urease function at 5 mM DMG. These enzymatic disruptions align with known microbial metabolic pathways that depend on nickel cofactors. In mouse models, oral DMG significantly reduced Salmonella organ burden by approximately one log and improved survival up to 50%. In wax moth larvae, pretreatment with DMG improved survival from 0% to 40–60% when challenged with MDR organisms. DMG itself showed no meaningful toxicity in either model across a wide dosing range. NMR analysis confirmed detectable levels of DMG in mouse liver tissue, supporting systemic absorption and explaining reductions in microbial virulence.

Key Outcome CategorySummary of Findings
Bacteriostatic EffectsGrowth suppressed at millimolar DMG levels; species-specific thresholds observed.
Enzyme InhibitionHydrogenase inhibited ≥0.5 mM; urease abolished at 5 mM DMG.
In Vivo Virulence Reduction1-log organ burden drop in mice; 40–60% survival in larvae.
Toxicity & AbsorptionNo measurable toxicity; DMG detected in liver via NMR.

Key implications

The findings indicate that nickel chelation represents a promising avenue for targeting MDR pathogens that depend on nickel-requiring enzymes for survival and virulence. For microbiome-focused clinical applications, the study expands a potentially valuable signature: the reliance of certain pathogens on nickel-dependent metabolic pathways. Inhibitors like DMG may offer adjunctive therapeutic strategies in cases where antibiotic resistance limits treatment options. Moreover, identifying nickel-dependent pathways broadens the landscape for precision microbiome manipulation by exploiting metal-based vulnerabilities in pathogenic organisms while minimally affecting the host. Further studies would be required to validate safety, organ distribution, and clinical efficacy in humans.

Citation

Benoit SL, Schmalstig AA, Glushka J, Maier SE, Edison AS, Maier RJ. Nickel chelation therapy as an approach to combat multi-drug resistant enteric pathogens.Scientific Reports. 2019;9:13851. doi:10.1038/s41598-019-50027-0

Dimethylglyoxime (DMG)

Dimethylglyoxime represents a novel therapeutic paradigm that exploits a fundamental metabolic difference between pathogenic bacteria and their mammalian hosts. By selectively depleting bacterial access to nickel, a cofactor essential for multiple pathogenic enzymes but unnecessary for human physiology, DMG offers a theoretically host-sparing antimicrobial approach.

Join the Roundtable

Contribute to published consensus reports, connect with top clinicians and researchers, and receive exclusive invitations to roundtable conferences.