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1H NMR- based metabolomics approaches as non-invasive tools for diagnosis of endometriosis A Comparative Study of Blood Levels of Manganese, Some Macroelements and Heavy Metals in Obese and Non-Obese Polycystic Ovary Syndrome Patients A Comparative Study of the Gut Microbiota Associated With Immunoglobulin a Nephropathy and Membranous Nephropathy A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist? A comprehensive analysis of breast cancer microbiota and host gene expression A comprehensive analysis of breast cancer microbiota and host gene expression A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women A cross-sectional pilot study of birth mode and vaginal microbiota in reproductive-age women A metabonomics approach as a means for identification of potentialbiomarkers for early diagnosis of endometriosis A More Diverse Cervical Microbiome Associates with Better Clinical Outcomes in Patients with Endometriosis: A Pilot Study A Multi-Omic Systems-Based Approach Reveals Metabolic Markers of Bacterial Vaginosis and Insight into the Disease A New Approach to Polycystic Ovary Syndrome: The Gut Microbiota A Review of the Anti-inflammatory Properties of Clindamycin in the Treatment of Acne Vulgaris A Systematic Review and Meta-Analysis of Premenstrual Syndrome with Special Emphasis on Herbal Medicine and Nutritional Supplements. Adherence to the Mediterranean Diet, Dietary Patterns and Body Composition in Women with Polycystic Ovary Syndrome (PCOS)

Metformin targets both the microbiome and inflammatory mechanisms in PCOS, improving insulin sensitivity, reducing hyperandrogenism, and restoring ovulation. Its microbial effects validate the condition’s microbiome signature, making it a promising microbiome-targeted intervention for managing infertility in PCOS.

Validation of Metformin as a Microbiome-Targeted Intervention for Polycystic ovary syndrome (PCOS)

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

May 15, 2025

Metformin targets both the microbiome and inflammatory mechanisms in COS, improving insulin sensitivity, reducing hyperandrogenism, and restoring ovulation. Its microbial effects validate the condition’s microbiome signature, making it a promising microbiome-targeted intervention for managing infertility in COS.

Researched by:

  • Divine Aleru ID
    Divine Aleru

    User avatarI am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

Last Updated: April 26, 2025

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

Overview

Metformin, a well-established insulin-sensitizing agent, has been widely studied for its role in managing polycystic ovary syndrome (PCOS), particularly in addressing anovulatory infertility. PCOS is associated with insulin resistance (IR), hyperandrogenism, and ovarian dysfunction. Metformin targets the root cause of these issues by improving insulin sensitivity, reducing hyperinsulinemia, and restoring hormonal balance. Additionally, it helps normalize ovarian function and induces ovulation, which is critical for women with PCOS who struggle with infertility. By targeting both microbial imbalances (such as gut dysbiosis that may exacerbate IR) and host inflammatory mechanisms (like cytokine modulation and insulin signaling), metformin represents a microbiome-targeted intervention (MBTI) that aligns with the clinical goals of restoring fertility in PCOS patients.[1][2]

Validation of Metformin as an MBTI

Metformin’s molecular and cellular mechanisms of action include reducing hepatic glucose production, enhancing insulin sensitivity, and modulating AMPK (AMP-activated protein kinase), a crucial regulator of cellular energy metabolism. It reduces the expression of pro-inflammatory cytokines like TNF-α, IL-6, and CRP, which are elevated in women with PCOS and contribute to insulin resistance and hyperandrogenism.[3] Several clinical studies have validated metformin’s role in improving ovulation and reducing androgen levels.[4] For example, a study demonstrated metformin’s effectiveness in reducing testosterone and restoring regular menstrual cycles in women with PCOS.[5] Additionally, metformin has been shown to lower the risk of ovarian hyperstimulation syndrome (OHSS) in women undergoing IVF, providing further evidence of its efficacy in fertility treatments.[6]

Microbial Effects Summary Table

Microbial EffectsImpact on PCOS Microbiome Signature
Increased Lactobacillus spp.A balanced ratio between these taxa is essential for improving insulin sensitivity, as seen in a healthy microbiome.
Decreased Bacteroides spp.Bacteroides, which are usually increased in healthy individuals, are often found in reduced abundance in women with PCOS.
Increased Firmicutes/Bacteroidetes ratioA balanced ratio between these taxa is essential for improving insulin sensitivity, as seen in healthy microbiomes.

Validation of the Microbiome Signature of PCOS

The microbiome signature of PCOS often reveals an imbalance between Firmicutes and Bacteroidetes, with an increase in Firmicutes and a decrease in Bacteroides.[7] Women with PCOS also exhibit reduced levels of beneficial bacteria like Lactobacillus, which play a key role in maintaining gut health and modulating immune responses. Metformin’s microbial effects, particularly its modulation of gut microbiota, help to shift this balance by increasing Lactobacillus and decreasing Firmicutes. These changes support the validity of the microbiome signature of PCOS, as they are consistent with the metabolic improvements seen in clinical outcomes such as reduced insulin resistance and improved hormonal balance (Johnson, 2014).

Dual Validation

The observed microbial shifts in the gut flora, such as increased Lactobacillus and a more balanced Firmicutes/Bacteroidetes ratio, validate metformin as a microbiome-targeted therapy (MBTI) for PCOS. These microbial changes align with improved metabolic and reproductive outcomes, reinforcing the accuracy of the microbiome signature of PCOS. Furthermore, metformin’s ability to reduce inflammation, improve insulin sensitivity, and restore ovulation supports its role as an effective treatment for both the microbiome dysbiosis and the clinical manifestations of PCOS. By addressing both the microbiome and host mechanisms, metformin provides a holistic approach to managing PCOS-related infertility.[8]

Polycystic ovary syndrome (PCOS)

Polycystic ovary syndrome (PCOS) is a common endocrine disorder that affects women of reproductive age, characterized by irregular menstrual cycles, hyperandrogenism, and insulin resistance. It is often associated with metabolic dysfunctions and inflammation, leading to fertility issues and increased risk of type 2 diabetes and cardiovascular disease.

Infertility

Infertility is the inability to conceive after 12 months of regular, unprotected sex. It affects both men and women and can be due to various physical, hormonal, or genetic factors. Treatments include medication, surgery, assisted reproductive technologies, and lifestyle changes.

Microbiome-Targeted Interventions (MBTIs)

Microbiome Targeted Interventions (MBTIs) are cutting-edge treatments that utilize information from Microbiome Signatures to modulate the microbiome, revolutionizing medicine with unparalleled precision and impact.

Microbiome-Targeted Interventions (MBTIs)

Microbiome Targeted Interventions (MBTIs) are cutting-edge treatments that utilize information from Microbiome Signatures to modulate the microbiome, revolutionizing medicine with unparalleled precision and impact.

References

  1. Role of Metformin in Polycystic Ovary Syndrome (PCOS)-Related Infertility. Attia GM, Almouteri MM, Alnakhli FT.. (Cureus. 2023 Aug 31;15(8):e44493)
  2. Metformin use in women with polycystic ovary syndrome. Johnson, N. (2014). (Annals Of Translational Medicine, 2(6), 56)
  3. Metformin use in women with polycystic ovary syndrome. Johnson, N. (2014). (Annals Of Translational Medicine, 2(6), 56)
  4. The Comparative Effects of Myo-Inositol and Metformin Therapy on the Clinical and Biochemical Parameters of Women of Normal Weight Suffering from Polycystic Ovary Syndrome. Gudović, A., Bukumirić, Z., Milincic, M., Pupovac, M., Andjić, M., Ivanovic, K., & Spremović-Rađenović, S. (2024). (Biomedicines, 12(2), 349)
  5. The Comparative Effects of Myo-Inositol and Metformin Therapy on the Clinical and Biochemical Parameters of Women of Normal Weight Suffering from Polycystic Ovary Syndrome. Gudović, A., Bukumirić, Z., Milincic, M., Pupovac, M., Andjić, M., Ivanovic, K., & Spremović-Rađenović, S. (2024). (Biomedicines, 12(2), 349)
  6. Metformin use in women with polycystic ovary syndrome. Johnson, N. (2014). (Annals Of Translational Medicine, 2(6), 56)
  7. Characterization of the gut microbiota in polycystic ovary syndrome with dyslipidemia. Yang, T., Li, G., Xu, Y. et al.. (BMC Microbiol 24, 169 (2024))
  8. Role of Metformin in Polycystic Ovary Syndrome (PCOS)-Related Infertility. Attia GM, Almouteri MM, Alnakhli FT.. (Cureus. 2023 Aug 31;15(8):e44493)

Attia GM, Almouteri MM, Alnakhli FT.

Role of Metformin in Polycystic Ovary Syndrome (PCOS)-Related Infertility

Cureus. 2023 Aug 31;15(8):e44493

Read Review

Johnson, N. (2014)

Metformin use in women with polycystic ovary syndrome

Annals Of Translational Medicine, 2(6), 56

Read Review

Johnson, N. (2014)

Metformin use in women with polycystic ovary syndrome

Annals Of Translational Medicine, 2(6), 56

Read Review

Gudović, A., Bukumirić, Z., Milincic, M., Pupovac, M., Andjić, M., Ivanovic, K., & Spremović-Rađenović, S. (2024)

The Comparative Effects of Myo-Inositol and Metformin Therapy on the Clinical and Biochemical Parameters of Women of Normal Weight Suffering from Polycystic Ovary Syndrome

Biomedicines, 12(2), 349

Read Review

Gudović, A., Bukumirić, Z., Milincic, M., Pupovac, M., Andjić, M., Ivanovic, K., & Spremović-Rađenović, S. (2024)

The Comparative Effects of Myo-Inositol and Metformin Therapy on the Clinical and Biochemical Parameters of Women of Normal Weight Suffering from Polycystic Ovary Syndrome

Biomedicines, 12(2), 349

Read Review

Johnson, N. (2014)

Metformin use in women with polycystic ovary syndrome

Annals Of Translational Medicine, 2(6), 56

Read Review

Attia GM, Almouteri MM, Alnakhli FT.

Role of Metformin in Polycystic Ovary Syndrome (PCOS)-Related Infertility

Cureus. 2023 Aug 31;15(8):e44493

Read Review
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