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1H NMR- based metabolomics approaches as non-invasive tools for diagnosis of endometriosis A Comparative Study of Blood Levels of Manganese, Some Macroelements and Heavy Metals in Obese and Non-Obese Polycystic Ovary Syndrome Patients A Comparative Study of the Gut Microbiota Associated With Immunoglobulin a Nephropathy and Membranous Nephropathy A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist? A comprehensive analysis of breast cancer microbiota and host gene expression A comprehensive analysis of breast cancer microbiota and host gene expression A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women A cross-sectional pilot study of birth mode and vaginal microbiota in reproductive-age women A metabonomics approach as a means for identification of potentialbiomarkers for early diagnosis of endometriosis A More Diverse Cervical Microbiome Associates with Better Clinical Outcomes in Patients with Endometriosis: A Pilot Study A Multi-Omic Systems-Based Approach Reveals Metabolic Markers of Bacterial Vaginosis and Insight into the Disease A New Approach to Polycystic Ovary Syndrome: The Gut Microbiota A Review of the Anti-inflammatory Properties of Clindamycin in the Treatment of Acne Vulgaris A Systematic Review and Meta-Analysis of Premenstrual Syndrome with Special Emphasis on Herbal Medicine and Nutritional Supplements. Adherence to the Mediterranean Diet, Dietary Patterns and Body Composition in Women with Polycystic Ovary Syndrome (PCOS)

Altered Microbiome-Derived Extracellular Vesicles in Peritoneal Fluid of Women with Endometriosis: Implications for Pathogenesis and Therapy Original paper

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

May 19, 2025

  • Women’s Health
    Women’s Health

    Women’s health, a vital aspect of medical science, encompasses various conditions unique to women’s physiological makeup. Historically, women were often excluded from clinical research, leading to a gap in understanding the intricacies of women’s health needs. However, recent advancements have highlighted the significant role that the microbiome plays in these conditions, offering new insights and potential therapies. MicrobiomeSignatures.com is at the forefront of exploring the microbiome signature of each of these conditions to unravel the etiology of these diseases and develop targeted microbiome therapies.

  • Endometriosis
    Endometriosis

    Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

Last Updated: 2024

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What was studied?

This study examined the microbiota composition in the peritoneal fluid of women with ovarian endometrioma, focusing specifically on microbiome analyses of extracellular vesicles (EVs). Extracellular vesicles are nanometer-sized particles released by cells, including bacteria, that carry microbial DNA and signaling molecules. The research aimed to determine if women with ovarian endometrioma exhibit distinct microbiota profiles in their peritoneal fluid compared to women without endometriosis. Microbial DNA was sequenced using next-generation sequencing (NGS) of the 16S rDNA V3–V4 regions, allowing for detailed taxonomic identification and comparative analysis.

Who was studied?

The study included 45 women diagnosed with histological evidence of ovarian endometrioma and 45 surgical controls confirmed to be free of endometriosis. Participants were recruited from Asan Medical Center, and peritoneal fluid samples were collected during laparoscopic procedures. Women with endometriosis were classified as having advanced-stage disease, and none of the participants had taken antibiotics, probiotics, or hormonal treatments for 12 weeks prior to sample collection.

What were the most important findings?

The microbiota composition of extracellular vesicles in peritoneal fluid was markedly different between women with ovarian endometrioma and controls. Alpha diversity analysis showed no significant differences in species richness between groups, but beta diversity analysis revealed distinct microbial community shifts in the endometriosis group (p <0.001). Taxonomic profiling demonstrated increased abundances of Acinetobacter, Pseudomonas, Streptococcus, and Enhydrobacter in women with ovarian endometrioma. Conversely, Propionibacterium, Actinomyces, and Rothia were significantly decreased in the endometriosis group (p <0.05).

At the family level, Pseudomonadaceae and Moraxellaceae were notably enriched in the endometriosis samples, while Veillonellaceae, Propionibacteriaceae, and Actinomycetaceae were reduced. The data also indicated a significant increase in Pseudomonadales and a decline in Actinomycetales at the order level (p <0.05). These findings suggest that the altered microbiota composition in extracellular vesicles of the peritoneal fluid may contribute to the inflammatory microenvironment observed in ovarian endometrioma.

Microbial GroupOvarian EndometriomaClinical Implications
AcinetobacterIncreasedLinked to inflammation and immune response in the peritoneal cavity
PseudomonasIncreasedAssociated with pathogenic processes in ovarian endometrioma
StreptococcusIncreasedPotential contributor to local inflammation and immune modulation
EnhydrobacterIncreasedMay play a role in extracellular signaling and immune responses
PropionibacteriumDecreasedLoss may disrupt protective anti-inflammatory effects
ActinomycesDecreasedReduced presence suggests compromised mucosal defenses
RothiaDecreasedMay contribute to a disrupted microbial ecosystem
Pseudomonadaceae (Family)EnrichedSuggests pathogenic influence in peritoneal fluid
Moraxellaceae (Family)EnrichedAssociated with peritoneal inflammation
Veillonellaceae, Propionibacteriaceae, Actinomycetaceae (Families)ReducedIndicates loss of protective and commensal populations

What are the greatest implications of this study?

The study provides compelling evidence that women with ovarian endometrioma possess distinct microbial communities in the peritoneal environment, carried via extracellular vesicles. The enrichment of pathogenic genera such as Pseudomonas and Acinetobacter, alongside the depletion of protective taxa like Propionibacterium and Actinomyces, suggests that these microbial imbalances could play a role in local inflammation and disease progression. These findings underscore the potential of microbiota-derived EVs as non-invasive biomarkers for ovarian endometrioma and open the door for targeted microbiome-modulating therapies to alleviate inflammatory responses and halt disease progression.

Endometriosis

Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

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