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1H NMR- based metabolomics approaches as non-invasive tools for diagnosis of endometriosis A Comparative Study of Blood Levels of Manganese, Some Macroelements and Heavy Metals in Obese and Non-Obese Polycystic Ovary Syndrome Patients A Comparative Study of the Gut Microbiota Associated With Immunoglobulin a Nephropathy and Membranous Nephropathy A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist? A comprehensive analysis of breast cancer microbiota and host gene expression A comprehensive analysis of breast cancer microbiota and host gene expression A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women A cross-sectional pilot study of birth mode and vaginal microbiota in reproductive-age women A metabonomics approach as a means for identification of potentialbiomarkers for early diagnosis of endometriosis A More Diverse Cervical Microbiome Associates with Better Clinical Outcomes in Patients with Endometriosis: A Pilot Study A Multi-Omic Systems-Based Approach Reveals Metabolic Markers of Bacterial Vaginosis and Insight into the Disease A New Approach to Polycystic Ovary Syndrome: The Gut Microbiota A Review of the Anti-inflammatory Properties of Clindamycin in the Treatment of Acne Vulgaris A Systematic Review and Meta-Analysis of Premenstrual Syndrome with Special Emphasis on Herbal Medicine and Nutritional Supplements. Adherence to the Mediterranean Diet, Dietary Patterns and Body Composition in Women with Polycystic Ovary Syndrome (PCOS)

Effect of endometriosis on the fecal bacteriota composition of mice during the acute phase of lesion formation Original paper

Researched by:

  • Kimberly Eyer ID
    Kimberly Eyer

    User avatarKimberly Eyer, a Registered Nurse with 30 years of nursing experience across diverse settings, including Home Health, ICU, Operating Room Nursing, and Research. Her roles have encompassed Operating Room Nurse, RN First Assistant, and Acting Director of a Same Day Surgery Center. Her specialty areas include Adult Cardiac Surgery, Congenital Cardiac Surgery, Vascular Surgery, and Neurosurgery.

May 19, 2025

  • Women’s Health
    Women’s Health

    Women’s health, a vital aspect of medical science, encompasses various conditions unique to women’s physiological makeup. Historically, women were often excluded from clinical research, leading to a gap in understanding the intricacies of women’s health needs. However, recent advancements have highlighted the significant role that the microbiome plays in these conditions, offering new insights and potential therapies. MicrobiomeSignatures.com is at the forefront of exploring the microbiome signature of each of these conditions to unravel the etiology of these diseases and develop targeted microbiome therapies.

  • Endometriosis
    Endometriosis

    Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

Researched by:

  • Kimberly Eyer ID
    Kimberly Eyer

    User avatarKimberly Eyer, a Registered Nurse with 30 years of nursing experience across diverse settings, including Home Health, ICU, Operating Room Nursing, and Research. Her roles have encompassed Operating Room Nurse, RN First Assistant, and Acting Director of a Same Day Surgery Center. Her specialty areas include Adult Cardiac Surgery, Congenital Cardiac Surgery, Vascular Surgery, and Neurosurgery.

Last Updated: 2019

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What Was Studied?

This study investigated the effect of endometriosis on the fecal bacteriota composition of mice during the acute phase of lesion formation. Researchers aimed to understand whether the establishment of endometriotic lesions would influence gut microbial communities, potentially contributing to systemic inflammation or metabolic disruptions associated with the disease. Uterine tissue fragments from GFP+ donor mice were transplanted into the peritoneal cavity of GFP- wild-type mice, inducing endometriotic lesions. Sham-transplanted mice served as controls. Fecal samples were collected three days before, and at 7 and 21 days after lesion induction, and analyzed through 16S rRNA gene sequencing to map changes in microbial composition.


Who Was Studied?

The study involved C57BL/6 wild-type mice as the experimental model for endometriosis. The model was established by transplanting uterine tissue fragments from GFP+ donor mice into the peritoneal cavity of GFP- recipient mice, allowing for easy visualization of endometriotic lesions. Sham-transplanted animals, which received physiological saline solution instead of tissue fragments, served as controls. The study analyzed fecal samples collected at specific time points to assess microbiota changes during the acute phase of endometriosis development.

What Were the Most Important Findings?

The study found that the induction of endometriosis did not produce significant changes in the composition of the fecal bacteriota during the acute phase of lesion formation (7 and 21 days post-transplantation). Despite the successful establishment of endometriotic lesions and typical histomorphology observed under fluorescence microscopy, alpha and beta diversity analyses showed no substantial differences between the endometriosis-induced group and sham controls. Detailed sequencing revealed a highly diverse microbial community dominated by Bacteroidales S24-7 group, Lactobacillus, Prevotellaceae UCG-001 group, and Lachnospiraceae NK4A136 group in both experimental and control mice. Notably, contrary to previous studies suggesting dysbiosis following endometriosis induction, this investigation showed microbial stability throughout the acute phase of lesion formation. The researchers speculated that gut microbiota disturbances may become apparent only in the chronic stages of the disease, reflecting long-term inflammation and tissue remodeling. Furthermore, the study emphasized that strict statistical controls, including the removal of singleton OTUs and application of false discovery rate (FDR) corrections, were applied to prevent false positives. These rigorous controls could have contributed to the observed stability of gut microbiota composition, challenging earlier reports of rapid dysbiosis post-endometriosis induction.

ParameterFindings in Endometriosis-Induced Mice
Microbiota CompositionNo significant changes in the overall composition of fecal bacteriota during the acute phase (7 and 21 days post-transplantation).
Alpha DiversityNo substantial differences observed between endometriosis-induced mice and sham controls, indicating microbial richness and evenness remained stable.
Beta DiversityAnalysis showed no significant shifts in microbial community structure between experimental and control groups.
Dominant GeneraMicrobiota was dominated by Bacteroidales S24-7 group, Lactobacillus, Prevotellaceae UCG-001 group, and Lachnospiraceae NK4A136 group in both groups.
Impact of Lesion FormationInduction of endometriosis did not disrupt gut microbiota composition during the acute phase of lesion establishment.
Statistical Controls AppliedStrict controls, including false discovery rate (FDR) corrections and removal of singleton OTUs, were applied to enhance result reliability.
Hypothesized Long-Term EffectsAuthors suggest that gut dysbiosis may only emerge in chronic stages of endometriosis, not during initial lesion establishment.

What Are the Greatest Implications of This Study?

The study challenges prevailing hypotheses that endometriosis immediately disrupts gut microbiota during the early phases of lesion formation. The findings suggest that intestinal dysbiosis may not occur in the acute phase but could instead be a consequence of chronic inflammation and prolonged disease progression. This insight implies that gut microbial changes observed in patients with endometriosis might reflect long-term disease dynamics rather than initial lesion establishment. These results underscore the need for longitudinal studies to distinguish between acute and chronic microbiome shifts in endometriosis. The findings also highlight the importance of standardized microbiome analysis protocols and strict statistical measures to accurately assess microbial composition in endometriosis models. Understanding the timeline of microbiome alterations in endometriosis could guide therapeutic strategies targeting microbial populations in chronic disease stages rather than acute phases.

Endometriosis

Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

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