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Exploration of the Relationship Between Gut Microbiota and Polycystic Ovary Syndrome (PCOS) Original paper

April 27, 2025

Last Updated: 2025

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Divine Aleru

I am a biochemist with a deep curiosity for the human microbiome and how it shapes human health, and I enjoy making microbiome science more accessible through research and writing. With 2 years experience in microbiome research, I have curated microbiome studies, analyzed microbial signatures, and now focus on interventions as a Microbiome Signatures and Interventions Research Coordinator.

What Was Reviewed?

This paper reviewed the current scientific understanding of the relationship between gut microbiota and polycystic ovary syndrome (PCOS), positioning the gut microbiome as a potentially central factor in the pathogenesis and management of the condition. It discussed how alterations in gut microbiota composition influence the development and manifestation of PCOS through complex metabolic, inflammatory, and hormonal pathways. The review synthesized a broad range of studies from both clinical research and animal models to clarify how specific microbial shifts contribute to insulin resistance, obesity, hyperandrogenism, inflammation, and even mood disturbances, all characteristic features of PCOS. The study also examined how clinicians can leverage therapeutic interventions, particularly those that modulate the microbiota, such as fecal microbiota transplantation, probiotics, prebiotics, lifestyle changes, and traditional Chinese medicine, to improve clinical outcomes in PCOS patients.

Who Was Reviewed?

The review incorporated findings from a range of human and animal studies focused on subjects diagnosed with PCOS, including those with and without obesity or insulin resistance. It analyzed data from trials where women with PCOS exhibited reduced microbial diversity and distinct microbial profiles compared to healthy controls. The paper also examined results from animal models of PCOS, particularly those induced with letrozole, where researchers demonstrated that fecal transplants from PCOS patients replicated metabolic and reproductive symptoms in recipient mice. In addition, it evaluated interventional studies involving patients treated with probiotics and prebiotics, which demonstrated favorable shifts in microbial composition and clinical markers. These various sources allowed the review to build a robust case for the role of gut microbiota in the etiology and progression of PCOS and to evaluate the therapeutic potential of microbiota modulation across diverse populations.

What Were the Most Important Findings?

The most critical takeaway from this review is the identification of gut microbiota dysbiosis as a key driver of PCOS pathophysiology. Reduced microbial diversity and an imbalance in the relative abundance of bacterial phyla such as Firmicutes and Bacteroidetes are consistently observed in PCOS patients. This microbial disruption correlates with multiple features of the syndrome, including insulin resistance, hyperandrogenism, and chronic inflammation. The review detailed several pathways through which gut microbiota contribute to PCOS. Disrupted energy metabolism allows the host to extract more calories from food, exacerbating obesity and insulin resistance.

Altered short-chain fatty acid production impairs glucose uptake and hormonal regulation. Elevated levels of lipopolysaccharides from gram-negative bacteria promote systemic inflammation and worsen insulin resistance. The metabolism of dietary choline into trimethylamine-N-oxide by gut microbes links PCOS to increased cardiovascular risk. Gut bacteria also regulate bile acid metabolism and influence hormonal balance through receptors such as FXR and TGR5. Furthermore, increased intestinal permeability in PCOS permits microbial endotoxins to leak into circulation, triggering inflammatory responses that disrupt insulin signaling and androgen metabolism. The review also emphasized the brain–gut axis, highlighting how microbiota disturbances contribute to emotional dysregulation in PCOS via serotonin and other neurotransmitter pathways.

What Are the Implications of This Review?

This review redefines PCOS as not merely a hormonal or reproductive disorder, but as a complex condition deeply rooted in metabolic and microbiome-related imbalances. The implications are significant for both diagnosis and treatment. Clinicians can begin to consider the gut microbiota profile as a biomarker for PCOS risk, symptom severity, and treatment response. It also suggests a paradigm shift in therapy, moving beyond symptomatic management toward strategies that address the underlying microbial disruptions. The effectiveness of probiotic and prebiotic interventions, shown to improve insulin sensitivity, reduce androgen levels, and regulate menstrual cycles, opens new therapeutic possibilities. Fecal microbiota transplantation (FMT), though still experimental, has shown early promise in animal models and may become a viable clinical tool. Traditional Chinese medicine, with compounds such as berberine and quercetin, offers additional microbiota-modulating options. Altogether, the review provides strong evidence that targeting the gut microbiome can become a foundational strategy in the long-term management of PCOS.

Polycystic ovary syndrome (PCOS)

Polycystic ovary syndrome (PCOS) is a common endocrine disorder that affects women of reproductive age, characterized by irregular menstrual cycles, hyperandrogenism, and insulin resistance. It is often associated with metabolic dysfunctions and inflammation, leading to fertility issues and increased risk of type 2 diabetes and cardiovascular disease.

Fecal Microbiota Transplantation (FMT)

Fecal Microbiota Transplantation (FMT) involves transferring fecal bacteria from a healthy donor to a patient to restore microbiome balance.

Fecal Microbiota Transplantation (FMT)

Fecal Microbiota Transplantation (FMT) involves transferring fecal bacteria from a healthy donor to a patient to restore microbiome balance.

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