Comprehensive Review: Genetic Architecture and Clinical Implications in Graves’ Disease Original paper

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

July 24, 2025

  • Autoimmune Diseases
    Autoimmune Diseases

    Autoimmune disease is when the immune system mistakenly attacks the body's tissues, often linked to imbalances in the microbiome, which can disrupt immune regulation and contribute to disease development.

  • Graves Disease
    Graves Disease

    OverviewGraves’ Disease (GD) affects approximately 0.5% of the population, predominantly women.  First-line treatment options—antithyroid medications, radioactive iodine, and surgery—  often result in significant side effects, incomplete remissions, and frequent relapses. Further, current first-line treatment options focus on symptoms management, and reflect an inadequate understanding of the etiology of the condition. However, recent research reveals a […]

Researched by:

  • Karen Pendergrass ID
    Karen Pendergrass

    User avatarKaren Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

Last Updated: 2025

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What was reviewed?

This narrative review synthesises more than three decades of genetic investigations into Graves’ disease (GD), spanning early candidate‑gene work through contemporary genome‑wide association studies (GWAS). It catalogues >80 susceptibility loci, detailing how immune‑regulatory (e.g., HLA‑DRB1, CTLA4, PTPN22) and thyroid‑specific (TSHR, TG) variants contribute to disease risk and phenotypic diversity. The authors chronologically trace methodological advances—from linkage analyses to large, multi‑ethnic GWAS—highlighting how each step refined our understanding of GD heritability (estimated at 60–80%) and polygenic architecture.

Who was reviewed?

The review aggregates evidence from over 30 000 individuals of European ancestry (Icelandic/UK) and nearly 10 000 East‑Asian participants (Chinese, Japanese, Korean), in addition to smaller Indonesian, Turkish and other cohorts. It contrasts allele frequencies, effect sizes and population‑specific signals (e.g., PTPN22*620W absent in Asians), thereby underscoring genetic heterogeneity and the importance of ancestry‑tailored risk models.

Most important findings

Across populations, the largest effects arise from HLA class II, CTLA4, TSHR and PTPN22, yet most variants confer modest odds ratios (~1.1). Notably, low‑frequency variants in FLT3 and ADCY7 exhibit larger effects (~1.5) and elevate circulating FLT3‑ligand, linking haematopoietic signalling to autoimmunity. The bubble plot on page 4 visually ranks the top 10 loci by odds ratio versus allele frequency, illustrating the inverse relationship between variant rarity and statistical power. Clinically oriented sections dissect genotype–phenotype links: specific CTLA4, HLA and TSHR alleles predict younger onset, larger goitres and higher thyroid‑stimulating antibody titres, while HLA‑B38:02/DRB108:03 mark risk for antithyroid‑drug‑induced agranulocytosis. Although the paper does not directly explore the thyroid microbiome, it foregrounds immune pathways (e.g., T‑cell co‑stimulation, B‑cell activation) that also mediate host–microbe cross‑talk, making these loci prime candidates for future microbiome–genome interaction studies and inclusion in microbiome signature databases.

Key implications

Elucidation of GD’s complex genetic landscape advances precision endocrinology: incorporating genotypes into the “GREAT+” score refines relapse prediction after antithyroid therapy, and CD40/HLA haplotypes may stratify responders to emerging biologics. Integrating genetic risk with environmental modifiers (stress, iodine, smoking) and, prospectively, thyroid‑resident microbiota could enable holistic risk stratification, personalised monitoring and targeted immunomodulation.

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