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1H NMR- based metabolomics approaches as non-invasive tools for diagnosis of endometriosis A Comparative Study of Blood Levels of Manganese, Some Macroelements and Heavy Metals in Obese and Non-Obese Polycystic Ovary Syndrome Patients A Comparative Study of the Gut Microbiota Associated With Immunoglobulin a Nephropathy and Membranous Nephropathy A comparative study of the gut microbiota in immune-mediated inflammatory diseases-does a common dysbiosis exist? A comprehensive analysis of breast cancer microbiota and host gene expression A comprehensive analysis of breast cancer microbiota and host gene expression A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women A cross-sectional pilot study of birth mode and vaginal microbiota in reproductive-age women A metabonomics approach as a means for identification of potentialbiomarkers for early diagnosis of endometriosis A More Diverse Cervical Microbiome Associates with Better Clinical Outcomes in Patients with Endometriosis: A Pilot Study A Multi-Omic Systems-Based Approach Reveals Metabolic Markers of Bacterial Vaginosis and Insight into the Disease A New Approach to Polycystic Ovary Syndrome: The Gut Microbiota A Review of the Anti-inflammatory Properties of Clindamycin in the Treatment of Acne Vulgaris A Systematic Review and Meta-Analysis of Premenstrual Syndrome with Special Emphasis on Herbal Medicine and Nutritional Supplements. Adherence to the Mediterranean Diet, Dietary Patterns and Body Composition in Women with Polycystic Ovary Syndrome (PCOS)

Molecular detection of microbial colonization in cervical mucus of women with and without endometriosis Original paper

Researched by:

  • Kimberly Eyer ID
    Kimberly Eyer

    User avatarKimberly Eyer, a Registered Nurse with 30 years of nursing experience across diverse settings, including Home Health, ICU, Operating Room Nursing, and Research. Her roles have encompassed Operating Room Nurse, RN First Assistant, and Acting Director of a Same Day Surgery Center. Her specialty areas include Adult Cardiac Surgery, Congenital Cardiac Surgery, Vascular Surgery, and Neurosurgery.

May 19, 2025

  • Women’s Health
    Women’s Health

    Women’s health, a vital aspect of medical science, encompasses various conditions unique to women’s physiological makeup. Historically, women were often excluded from clinical research, leading to a gap in understanding the intricacies of women’s health needs. However, recent advancements have highlighted the significant role that the microbiome plays in these conditions, offering new insights and potential therapies. MicrobiomeSignatures.com is at the forefront of exploring the microbiome signature of each of these conditions to unravel the etiology of these diseases and develop targeted microbiome therapies.

  • Endometriosis
    Endometriosis

    Endometriosis involves ectopic endometrial tissue causing pain and infertility. Validated and Promising Interventions include Hyperbaric Oxygen Therapy (HBOT), Low Nickel Diet, and Metronidazole therapy.

Researched by:

  • Kimberly Eyer ID
    Kimberly Eyer

    User avatarKimberly Eyer, a Registered Nurse with 30 years of nursing experience across diverse settings, including Home Health, ICU, Operating Room Nursing, and Research. Her roles have encompassed Operating Room Nurse, RN First Assistant, and Acting Director of a Same Day Surgery Center. Her specialty areas include Adult Cardiac Surgery, Congenital Cardiac Surgery, Vascular Surgery, and Neurosurgery.

Last Updated: 2019

Microbiome Signatures identifies and validates condition-specific microbiome shifts and interventions to accelerate clinical translation. Our multidisciplinary team supports clinicians, researchers, and innovators in turning microbiome science into actionable medicine.

Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease—four years before the first published case study.

What Was Studied?

This study investigated the molecular detection of microbial colonization in cervical mucus of women with and without endometriosis using next-generation sequencing (NGS) technology. The primary aim was to explore whether specific microbial populations in the cervical mucus are associated with endometriosis and could contribute to its pathogenesis. Researchers collected cervical mucus samples from 30 women with endometriosis and 39 women without the condition. The microbial communities were analyzed through 16S rRNA gene sequencing, alongside Gram staining and real-time PCR to validate the presence of specific bacterial species. This study sought to identify microbial signatures that may play a role in the inflammation and immune responses linked to endometriosis progression.

Who Was Studied?

The study included 69 women of reproductive age, with 30 diagnosed with endometriosis (all classified as r-ASRM stages III-IV) and 39 serving as healthy controls. All participants underwent laparoscopic surgery for diagnosis or benign gynecological conditions. Cervical mucus samples were collected before surgery under sterile conditions to prevent contamination, ensuring accurate representation of the microbiota present. Women with gynecological malignancies, pelvic inflammatory disease, bacterial vaginosis, or recent antibiotic use were excluded to prevent confounding microbial shifts.

What Were the Most Important Findings?

The analysis revealed that cervical mucus in women with endometriosis harbored distinct microbial communities compared to healthy controls. While Lactobacillus spp. remained dominant across all samples, women with endometriosis showed increased populations of Enterobacteriaceae, Streptococcus, Corynebacterium, Pseudomonas, and Flavobacterium. Notably, Enterobacteriaceae and Streptococcus were significantly enriched in endometriosis patients, as confirmed by real-time PCR analysis (p <0.05). This elevated presence suggests these bacteria may contribute to inflammatory cascades in the cervix and potentially facilitate disease persistence. Additionally, alpha diversity was significantly higher in the cervical mucus of endometriosis patients, indicating a broader microbial distribution. The study also noted that despite high Lactobacillus prevalence (40–60%), the co-existence of pathogenic bacteria like Enterobacteriaceae and Streptococcus was unique to the endometriosis group, hinting at microbial imbalance. These findings support the hypothesis that cervical microbial colonization could be linked to the development and maintenance of endometriosis through immune modulation and inflammatory responses. The study further postulated that the ascent of these pathogens from the cervix into the uterine cavity may exacerbate inflammatory conditions, potentially triggering endometriosis progression via LPS/TLR4 signaling and innate immune activation.

ParameterFindings in Endometriosis Patients
Dominant GeneraLactobacillus spp. remained dominant in both endometriosis patients and controls, with 40–60% prevalence.
Increased GeneraMarked increases in Enterobacteriaceae, Streptococcus, Corynebacterium, Pseudomonas, and Flavobacterium.
Significant EnrichmentEnterobacteriaceae and Streptococcus were significantly enriched (p <0.05) in the endometriosis group.
Alpha DiversityHigher alpha diversity observed in endometriosis patients, indicating broader microbial distribution in cervical mucus.
Pathogenic Co-ExistenceDespite high Lactobacillus prevalence, Enterobacteriaceae and Streptococcus co-existed exclusively in the endometriosis group.
Inflammatory AssociationsThese pathogens are suspected to drive inflammatory cascades, contributing to lesion persistence and immune dysregulation.
Migration HypothesisPotential pathogen ascent from the cervix to the uterine cavity may exacerbate inflammation and promote endometriosis via LPS/TLR4 signaling and innate immune activation.

What Are the Greatest Implications of This Study?

The study provides compelling evidence that specific microbial communities in cervical mucus—particularly Enterobacteriaceae and Streptococcus—are associated with endometriosis. This microbial imbalance suggests that the cervical microbiome may serve as both a diagnostic biomarker and a therapeutic target for endometriosis management. The findings highlight the possibility of cervical microbial migration into the uterine cavity as a driver of inflammation and lesion growth, underscoring the need for further exploration into microbiota-targeted therapies. By identifying microbial dysbiosis at the cervical level, this study opens the door to non-invasive diagnostic methods and preventive strategies aimed at reducing microbial-induced inflammation in endometriosis patients.

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